rfhg_133119.1

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Basic information about the TSS


TSS ID:rfhg_133119.1
Species:human
Chr:chr11
Start:2138605
End:2138670
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2414748,EH38E1515093)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AF217977:26
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF370737:44
  • MA606314:44
  • M17426:47
  • S77035:50
  • BC000531:-64
  • J03242:-102
  • LF370738:-107
  • MA606315:-107
  • X06260:206
  • LF370739:-208
  • MA606316:-208
  • X06161:275
  • ENST00000381406.8:-304
  • BC053318:-304
  • X06159:362
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:752
Nearest PromoterID:NM_000612
Entrez ID:3481
Nearest Unigene:Hs.272259
Nearest Refseq:NM_000612
Nearest Ensembl:ENSG00000167244
Gene Name:
Gene Alias:C11orf43|GRDF|IGF-II|PP9974
Gene Type:protein-coding
CpG%:0.076923
GC%:0.560606
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):