rfhg_133280.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_133280.1
Species:human
Chr:chr11
Start:2899628
End:2899634
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2415855,EH38E1515836)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_183233.3:57
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000347936.6:87
  • BC015571:87
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-60
Nearest PromoterID:NM_183233
Entrez ID:5002
Nearest Unigene:Hs.50868
Nearest Refseq:NM_002555
Nearest Ensembl:ENSG00000110628
Gene Name:
Gene Alias:BWR1A|BWSCR1A|HET|IMPT1|ITM|ORCTL2|SLC22A1L|TSSC5|p45-BWR1A
Gene Type:protein-coding
CpG%:0.000000
GC%:0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):