rfhg_133445.1

Basic information about the TSS

TSS ID:	rfhg_133445.1
Species:	human
Chr:	chr11

Start:	4094879
End:	4094903
Strand:	+

Source datasets

PRJNA548673

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2416981,EH38E1516648)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF213923:-20 MA449500:-20
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	BC006498:-25 ENST00000526350.5:-27 AK297988:-27 ENST00000533349.5:-36 AK303394:-36 X59617:-47 X59543:-52 AK307950:-70 ENST00000526865.5:-74 AK299629:-74 AK222786:-74 ENST00000532170.5:-80 ENST00000300738.10:-80 NM_001033.5:-80 AK122695:-80 LF369305:83 MA604882:83 KJ897508:105 CU675435:110 DQ896272:110 DQ893028:110 ENST00000532710.5:-172 LF207801:-175 MA443378:-175 NM_001318064.1:-194 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	92
Nearest PromoterID:	NM_001033
Entrez ID:	6240
Nearest Unigene:	Hs.445705
Nearest Refseq:	NM_001033
Nearest Ensembl:	ENSG00000167325
Gene Name:
Gene Alias:	R1\|RIR1\|RR1
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.520000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "BC006498:-25 ENST00000526350.5:-27 AK297988:-27 ENST00000533349.5:-36 AK303394:-36 X59617:-47 X59543:-52 AK307950:-70 ENST00000526865.5:-74 AK299629:-74 AK222786:-74 ENST00000532170.5:-80 ENST00000300738.10:-80 NM_001033.5:-80 AK122695:-80 LF369305:83 MA604882:83 KJ897508:105 CU675435:110 DQ896272:110 DQ893028:110 ENST00000532710.5:-172 LF207801:-175 MA443378:-175 NM_001318064.1:-194" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.