rfhg_133456.1

Basic information about the TSS

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TSS ID: rfhg_133456.1 Species: human Chr: chr11		Start: 4393651 End: 4393723 Strand: -
Source datasets	PRJNA4843412|DRA013844|PRJNA401781|PRJNA615891|PRJNA548673 |PRJDB5282
Protocol	NETCAGE|CAGE|RAMPAGE|SLIC_CAGE|TIF-seq2|ReCappable-seq |C1CAGE
TSS cluster detected*	9

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2417097,EH38E1516709)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000254436.8:0 BC010861:0 AK225564:0 M62800:0 GeneID: 6737 HGNC/MGI_ID: HGNC:11312 UniProt_ID: P19474 Nearer transcript ids and distances:

Gene_name: tripartite motif containing 21 Gene_symbol: TRIM21 Gene_synonyms: RNF81 RO52 Gene_source: HGNC:11312

TATA-Box annotation

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Distance to TSS:	15
Nearest PromoterID:	NM_003141
Entrez ID:	6737
Nearest Unigene:	Hs.532357
Nearest Refseq:	NM_003141
Nearest Ensembl:	ENSG00000132109
Gene Name:	tripartite motif containing 21
Gene Alias:	RNF81|RO52|Ro/SSA|SSA|SSA1
Gene Type:	protein-coding
CpG%:	0.013889
GC%:	0.534247
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.