rfhg_133457.1

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Basic information about the TSS


TSS ID:rfhg_133457.1
Species:human
Chr:chr11
Start:4393796
End:4393819
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2417097,EH38E1516709)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:MG828484:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000641797.2:-13
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-105
Nearest PromoterID:NM_003141
Entrez ID:6737
Nearest Unigene:Hs.532357
Nearest Refseq:NM_003141
Nearest Ensembl:ENSG00000132109
Gene Name:
Gene Alias:RNF81|RO52|Ro/SSA|SSA|SSA1
Gene Type:protein-coding
CpG%:0.043478
GC%:0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):