rfhg_133957.1
Basic information about the TSS
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| Source datasets | PRJNA548673 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2420422,EH38E1518846) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 34 |
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| Nearest PromoterID: | NM_001286094 |
| Entrez ID: | 56674 |
| Nearest Unigene: | Hs.501853 |
| Nearest Refseq: | NM_020644 |
| Nearest Ensembl: | ENSG00000175348 |
| Gene Name: | |
| Gene Alias: | C11orf15 |
| Gene Type: | protein-coding |
| CpG%: | 0.153846 |
| GC%: | 0.714286 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "AK300712:-188 NM_001286095.2:-201 ENST00000525069.5:-265 BC040124:278 ENST00000534025.6:291 NM_020644.3:291 NM_001286094.2:291 ENST00000309134.9:292 AY359069:317 AK313065:330 ENST00000528117.5:331 AK316216:331 AK310723:331 BC015884:333 AB097017:335 AK074677:342 KJ894344:420" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.