rfhg_134712.1

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Basic information about the TSS


TSS ID:rfhg_134712.1
TSS ID(Version3):hg_118857.1
Species:human
Chr:chr11
Start:17207928
End:17208001
Strand:-
Source datasetsFANTOM5|EPD|DBTSS|DRA000914|PRJDB5282|PRJNA4843412
|DRA013844|PRJNA615891|PRJNA597322|PRJNA401781|PRJNA548673
ProtocolCAGE|TSS_database|TSS-seq|C1CAGE|NETCAGE|TIF-seq2
|STRIPE-seq|RAMPAGE|SLIC_CAGE|ReCappable-seq
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D2428138,EH38E1524546)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000533645.1:0
ENST00000532035.1:0
ENST00000503729.2:0
AK304262:0
AK294416:0
AK299474:0
AK310248:0
BC040952:0
BC031681:0
BC035982:0
GeneID:5286
HGNC/MGI_ID:HGNC:8971
UniProt_ID:A0A0C4DGF9 B4DG55 B4DRX6 E9PPP3
Nearer transcript ids and distances:
  • ENST00000531428.1:8
  • AK309610:10
view more...
Gene_name:phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
Gene_symbol:PIK3C2A
Gene_synonyms:PI3K-C2alpha
Gene_source:HGNC:8971



TATA-Box annotation


Distance to TSS:22
Nearest PromoterID:NM_001321380
Entrez ID:5286
Nearest Unigene:Hs.175343
Nearest Refseq:NM_002645
Nearest Ensembl:ENSG00000011405
Gene Name:phosphatidylinositol-4-phosphate 3-kinase catalytic subunit type 2 alpha
Gene Alias:CPK|OCSKD|PI3-K-C2(ALPHA)|PI3-K-C2A|PI3K-C2-alpha|PI3K-C2alpha
Gene Type:protein-coding
CpG%:0.109589
GC%:0.675676
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.