rfhg_134834.1

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Basic information about the TSS


TSS ID:rfhg_134834.1
Species:human
Chr:chr11
Start:18236796
End:18236813
Strand:-
Source datasetsFANTOM5|EPD|RAMPAGE
ProtocolCAGE|TSS_database|RAMPAGE
TSS cluster detected*3

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2429013,EH38E1525116)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000278222.7:0
GeneID:6291
HGNC/MGI_ID:HGNC:10516
UniProt_ID:P35542
Nearer transcript ids and distances:
  • M81349:9
  • AK312182:9
  • BC007026:27
view more...
Gene_name:serum amyloid A4, constitutive
Gene_symbol:SAA4
Gene_synonyms:C-SAA CSAA
Gene_source:HGNC:10516



TATA-Box annotation


Distance to TSS:-2
Nearest PromoterID:NM_006512
Entrez ID:6291
Nearest Unigene:Hs.1955
Nearest Refseq:NM_006512
Nearest Ensembl:ENSG00000148965
Gene Name:serum amyloid A4, constitutive
Gene Alias:C-SAA|CSAA
Gene Type:protein-coding
CpG%:0.000000
GC%:0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.