rfhg_13542.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2225528,EH38E1387029) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 549 |
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| Nearest PromoterID: | NM_198264 |
| Entrez ID: | 10712 |
| Nearest Unigene: | Hs.348308 |
| Nearest Refseq: | NM_006589 |
| Nearest Ensembl: | ENSG00000160767 |
| Gene Name: | endosomal transmembrane epsin interactor 3 |
| Gene Alias: | C1orf2|COTE1 |
| Gene Type: | protein-coding |
| CpG%: | 0.038462 |
| GC%: | 0.592593 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "BC040136:-13 BC006493:-16 BC007444:-16 ENST00000472550.5:-17 BC033707:-20 ENST00000368368.7:-21 CU679147:42 KJ902145:42 KJ906055:42 KJ893117:42 KJ906054:42 CU691816:42 EU446765:43 AB587342:43 ENST00000487649.5:-244 BC017262:-244 BC008854:-400 BC010471:-440" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.