rfhg_13546.1

Basic information about the TSS

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TSS ID: rfhg_13546.1 TSS ID(Version3): hg_14945.1 hg_14944.1 Species: human Chr: chr1		Start: 155255424 End: 155255493 Strand: -
Source datasets	FANTOM5|EPD|PRJNA4843412|DRA013844|PRJNA615891|PRJNA401781 |PRJNA548673
Protocol	CAGE|TSS_database|NETCAGE|TIF-seq2|SLIC_CAGE|RAMPAGE |oligo_capping|ReCappable-seq
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2225529,EH38E1387030)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000361361.7:0 ENST00000621094.4:0 ENST00000481822.1:0 AK093335:0 GeneID: 10712 HGNC/MGI_ID: HGNC:1233 UniProt_ID: P81408 Q96H71 Nearer transcript ids and distances: BC010471:37 BC008854:77 ENST00000487649.5:233 BC017262:233 ENST00000368368.7:456 BC033707:457 ENST00000472550.5:460 BC006493:461 BC007444:461 ENST00000350210.6:464 BC040136:464 view more...

Gene_name: endosomal transmembrane epsin interactor 3 Gene_symbol: ENTREP3 Gene_synonyms: cote1 Gene_source: HGNC:1233

TATA-Box annotation

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Distance to TSS:	25
Nearest PromoterID:	NM_198264
Entrez ID:	10712
Nearest Unigene:	Hs.348308
Nearest Refseq:	NM_006589
Nearest Ensembl:	ENSG00000160767
Gene Name:	endosomal transmembrane epsin interactor 3
Gene Alias:	C1orf2|COTE1
Gene Type:	protein-coding
CpG%:	0.086957
GC%:	0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.