rfhg_135712.1

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Basic information about the TSS


TSS ID:rfhg_135712.1
Species:human
Chr:chr11
Start:34438707
End:34438720
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2440516,EH38E1531989)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF205797:184
MA441374:184
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK291585:205
  • ENST00000241052.5:214
  • NM_001752.4:214
  • BC110398:216
  • AK315350:221
  • X04076:224
  • BC112217:256
  • BC112219:256
  • GQ891493:256
  • LF348344:287
  • MA583921:287
  • AB587573:290
  • HQ258304:294
  • AY028632:294
  • KJ890831:294
  • KR711567:294
  • KR711568:294
  • KR711569:294
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-221
Nearest PromoterID:NM_001752
Entrez ID:847
Nearest Unigene:Hs.502302
Nearest Refseq:NM_001752
Nearest Ensembl:ENSG00000121691
Gene Name:
Gene Alias:-
Gene Type:protein-coding
CpG%:0.076923
GC%:0.642857
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):