rfhg_136321.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_136321.1
Species:human
Chr:chr11
Start:45771417
End:45771453
Strand:+
Source datasetsFANTOM5|EPD
ProtocolCAGE|TSS_database
TSS cluster detected*2

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2448639,EH38E1536887)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000378779.4:0
BX640618:0
GeneID:374387
HGNC/MGI_ID:HGNC:25454
UniProt_ID:Q6N098
Nearer transcript ids and distances:
  • BC126374:49
  • BC126376:49
view more...
Gene_name:long intergenic non-protein coding RNA 2716
Gene_symbol:LINC02716
Gene_synonyms:
Gene_source:HGNC:25454



TATA-Box annotation


Distance to TSS:3
Nearest PromoterID:NR_027134
Entrez ID:374387
Nearest Unigene:Hs.632142
Nearest Refseq:NM_199137
Nearest Ensembl:ENSG00000205106
Gene Name:long intergenic non-protein coding RNA 2716
Gene Alias:DKFZp779M0652
Gene Type:ncRNA
CpG%:0.138889
GC%:0.648649
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.