rfhg_136752.1

Basic information about the TSS

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TSS ID: rfhg_136752.1 TSS ID(Version3): hg_114228.1 hg_233013.1 Species: human Chr: chr11		Start: 47579010 End: 47579090 Strand: +
Source datasets	FANTOM5|DBTSS|DRA000914|ENCODE|RAMPAGE|PRJNA548673 |PRJNA401781|PRJNA4843412|DRA013844|PRJNA615891|PRJNA597322
Protocol	CAGE|TSS-seq|RAMPAGE|ReCappable-seq|oligo_capping|NETCAGE |SLIC_CAGE|STRIPE-seq|TIF-seq2
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2450440,EH38E1538351)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000529276.1:0 ENST00000528192.5:0 ENST00000530295.5:0 ENST00000534208.5:0 ENST00000534716.2:0 ENST00000263774.9:0 ENST00000533105.1:0 BC000617:0 AK313802:0 AK223255:0 AF067139:0 AF100743:0 AK294167:0 GeneID: 4722 HGNC/MGI_ID: HGNC:7710 UniProt_ID: E9PJE7 E9PKL8 E9PS48 G3V194 O75489 Q53FM7 Nearer transcript ids and distances: DQ895121:1 KJ891680:1 KR710624:1 KR710625:1 KR710626:1 DQ891934:1 ENST00000524568.1:9 ENST00000677462.1:33 ENST00000678975.1:38 ENST00000531351.2:49 view more...

Gene_name: NADH:ubiquinone oxidoreductase core subunit S3 Gene_symbol: NDUFS3 Gene_synonyms: CI-30 Gene_source: HGNC:7710

TATA-Box annotation

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Distance to TSS:	-24
Nearest PromoterID:	NM_004551
Entrez ID:	4722
Nearest Unigene:	Hs.502528
Nearest Refseq:	NM_004551
Nearest Ensembl:	ENSG00000213619
Gene Name:	NADH:ubiquinone oxidoreductase core subunit S3
Gene Alias:	CI-30|MC1DN8
Gene Type:	protein-coding
CpG%:	0.075000
GC%:	0.592593
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.