rfhg_137252.1
From referenceTSS
Basic information about the TSS
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| Source datasets | PRJNA4843412|DRA013844|PRJNA401781|PRJNA597322|PRJNA615891 |PRJNA548673 | |||||||||||||
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| Protocol | NETCAGE|CAGE|oligo_capping|RAMPAGE|STRIPE-seq|SLIC_CAGE |TIF-seq2|ReCappable-seq | |||||||||||||
| TSS cluster detected* | 9 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | pELS,CTCF-bound (EH38D2453894,EH38E1540560) |
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| Category: | pELS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 18 |
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| Nearest PromoterID: | NM_152716 |
| Entrez ID: | 219988 |
| Nearest Unigene: | Hs.591960 |
| Nearest Refseq: | NM_152716 |
| Nearest Ensembl: | ENSG00000166889 |
| Gene Name: | PAT1 homolog 1, processing body mRNA decay factor |
| Gene Alias: | Pat1b|hPat1b |
| Gene Type: | protein-coding |
| CpG%: | 0.184211 |
| GC%: | 0.805195 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.