rfhg_139442.1

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Basic information about the TSS


TSS ID:rfhg_139442.1
Species:human
Chr:chr11
Start:65553843
End:65553853
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2459886,EH38E1545304)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF344427:0
MA580004:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AF318354:-10
  • ENST00000530426.1:116
  • ENST00000524798.1:-287
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:4380
Nearest PromoterID:NM_001164266
Entrez ID:4054
Nearest Unigene:Hs.289019
Nearest Refseq:NM_021070
Nearest Ensembl:ENSG00000168056
Gene Name:
Gene Alias:DASS|GPHYSD3|LTBP-3|LTBP2|STHAG6|pp6425
Gene Type:protein-coding
CpG%:0.000000
GC%:0.636364
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):