rfhg_140636.1

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Basic information about the TSS


TSS ID:rfhg_140636.1
TSS ID(Version3):hg_121121.1
hg_121119.1
hg_121120.1
Species:human
Chr:chr11
Start:71928401
End:71928636
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJDB5282|PRJNA401781|PRJNA548673
|PRJNA4843412|DRA013844|PRJNA597322
ProtocolCAGE|TSS_database|C1CAGE|oligo_capping|ReCappable-seq
|NETCAGE|STRIPE-seq
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2466773,EH38E1550359)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000679695.1:0
ENST00000679412.2:0
ENST00000528511.6:0
ENST00000529513.5:0
ENST00000533047.5:0
ENST00000534704.5:0
ENST00000528184.1:0
ENST00000531488.1:0
GeneID:100133315
HGNC/MGI_ID:
UniProt_ID:E9PIP4 E9PJ82 E9PLZ0 E9PP57 E9PQ18
Nearer transcript ids and distances:
  • ENST00000529844.5:-18
Gene_name:XRCC1 N-terminal domain containing 1, N-terminal like
Gene_symbol:XNDC1N
Gene_synonyms:
Gene_source:EntrezGene:100133315



TATA-Box annotation


Distance to TSS:-71
Nearest PromoterID:NR_029192
Entrez ID:100133315
Nearest Unigene:Hs.150324
Nearest Refseq:NR_029192
Nearest Ensembl:
Gene Name:XRCC1 N-terminal domain containing 1, N-terminal like
Gene Alias:-
Gene Type:pseudo
CpG%:0.046809
GC%:0.491525
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.