rfhg_140637.1
Basic information about the TSS
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| Source datasets | FANTOM5|DRA000914 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2466774,EH38E1550360) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -68 |
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| Nearest PromoterID: | NR_024148 |
| Entrez ID: | 55298 |
| Nearest Unigene: | Hs.368554 |
| Nearest Refseq: | NM_018320 |
| Nearest Ensembl: | ENSG00000137522 |
| Gene Name: | XRCC1 N-terminal domain containing 1, N-terminal like |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.062500 |
| GC%: | 0.515152 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000533047.5:14 ENST00000528511.6:43 ENST00000679412.2:44 ENST00000528184.1:44 NR_172895.1:44 NR_172894.1:44 NR_172893.1:44 NM_001375848.2:44 NM_001375847.2:44 ENST00000531488.1:191 AK131288:196 ENST00000529513.5:201 ENST00000679695.1:217 ENST00000534704.5:235" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.