rfhg_140973.1
Basic information about the TSS
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| Source datasets | EPD | |||||||||||||
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| Protocol | TSS_database | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2468856,EH38E1552009) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 7 |
|---|---|
| Nearest PromoterID: | NM_001267806 |
| Entrez ID: | 80227 |
| Nearest Unigene: | Hs.525017 |
| Nearest Refseq: | NM_025155 |
| Nearest Ensembl: | ENSG00000175575 |
| Gene Name: | proteasomal ATPase associated factor 1 |
| Gene Alias: | PAAF|Rpn14|WDR71 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 1.000000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000381783.4:268 BC028677:268 ENST00000504441.6:274 AK222501:282 AK021910:282 ENST00000543814.5:286 ENST00000535604.5:289 AK316394:289 ENST00000542293.5:291 ENST00000536003.5:291 ENST00000310571.8:293 NM_001267805.2:293 NM_025155.3:293 NM_001267804.2:293 NM_001267803.2:293 BC045774:295 AK225520:295 BC021541:299 BC028628:301 BC006142:310 CU675271:316 HQ448172:316 KJ899624:316 KJ906333:316 ENST00000544552.5:322 AF087895:322" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.