rfhg_140975.1

Basic information about the TSS

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TSS ID: rfhg_140975.1 Species: human Chr: chr11		Start: 73876985 End: 73877027 Strand: +
Source datasets	DRA013844|PRJDB5282|PRJNA4843412|PRJNA548673|PRJNA401781 |PRJNA615891|PRJNA597322
Protocol	CAGE|C1CAGE|NETCAGE|ReCappable-seq|RAMPAGE|SLIC_CAGE |oligo_capping|TIF-seq2|STRIPE-seq
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	-
Category:	-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000543814.5:0 ENST00000535604.5:0 ENST00000542293.5:0 ENST00000536003.5:0 ENST00000310571.8:0 AK222501:0 AK021910:0 AK316394:0 BC045774:0 AK225520:0 BC021541:0 BC028628:0 BC006142:0 CU675271:0 HQ448172:0 GeneID: 80227 HGNC/MGI_ID: HGNC:25687 UniProt_ID: A0A024R5N4 F5H3E9 F5H3I1 Q9BRP4 Nearer transcript ids and distances: ENST00000544552.5:1 AF087895:1 ENST00000504441.6:-5 ENST00000381783.4:-11 BC028677:-11 ENST00000541951.5:-286 NM_001267806.2:-286 AK298258:-286 view more...

Gene_name: proteasomal ATPase associated factor 1 Gene_symbol: PAAF1 Gene_synonyms: FLJ11848 Rpn14 Gene_source: HGNC:25687

TATA-Box annotation

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Distance to TSS:	7
Nearest PromoterID:	NM_001267805
Entrez ID:	80227
Nearest Unigene:	Hs.525017
Nearest Refseq:	NM_025155
Nearest Ensembl:	ENSG00000175575
Gene Name:	proteasomal ATPase associated factor 1
Gene Alias:	PAAF|Rpn14|WDR71
Gene Type:	protein-coding
CpG%:	0.095238
GC%:	0.744186
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.