rfhg_141139.1
From referenceTSS
Basic information about the TSS
|
| |||||||||||||||
Source datasets | FANTOM5|EPD|DBTSS|DRA000914|ENCODE|RAMPAGE|PRJNA401781 |PRJNA615891|PRJNA548673|PRJNA597322|PRJNA4843412|DRA013844 |PRJDB5282 | |||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Protocol | CAGE|TSS_database|TSS-seq|RAMPAGE|SLIC_CAGE|ReCappable-seq |oligo_capping|STRIPE-seq|TIF-seq2|NETCAGE|C1CAGE | |||||||||||||||
TSS cluster detected* | 17 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D2470264,EH38E1553083) |
---|---|
Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 13 |
---|---|
Nearest PromoterID: | NM_001256802 |
Entrez ID: | 6188 |
Nearest Unigene: | Hs.546286 |
Nearest Refseq: | NM_001005 |
Nearest Ensembl: | ENSG00000149273 |
Gene Name: | ribosomal protein S3 |
Gene Alias: | S3 |
Gene Type: | protein-coding |
CpG%: | 0.085366 |
GC%: | 0.554217 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.