rfhg_141357.1

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Basic information about the TSS


TSS ID:rfhg_141357.1
Species:human
Chr:chr11
Start:77571347
End:77571357
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS,CTCF-bound (EH38D2472587,EH38E1554818)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK096213:0
GeneID:646029
HGNC/MGI_ID:HGNC:56171
UniProt_ID:Q8N8T7
Nearer transcript ids and distances:
  • BC132853:17
  • AK093267:-191
  • NR_130930.1:-258
view more...
Gene_name:long intergenic non-protein coding RNA 3030
Gene_symbol:LINC03030
Gene_synonyms:
Gene_source:HGNC:56171



TATA-Box annotation


Distance to TSS:263
Nearest PromoterID:NR_130930
Entrez ID:646029
Nearest Unigene:Hs.609654
Nearest Refseq:NM_001039908
Nearest Ensembl:
Gene Name:long intergenic non-protein coding RNA 3030
Gene Alias:-
Gene Type:ncRNA
CpG%:0.000000
GC%:0.363636
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.