rfhg_141424.1

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Basic information about the TSS


TSS ID:rfhg_141424.1
TSS ID(Version3):hg_121470.1
Species:human
Chr:chr11
Start:78139584
End:78139644
Strand:-
Source datasetsFANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA615891|PRJNA401781
|PRJNA548673|PRJDB5282|PRJNA597322|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|TSS-seq|TIF-seq2|oligo_capping
|ReCappable-seq|SLIC_CAGE|RAMPAGE|C1CAGE|STRIPE-seq|NETCAGE
TSS cluster detected*16

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2473012,EH38E1555119)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000681221.1:0
ENST00000680761.1:0
ENST00000525783.6:0
ENST00000529139.6:0
ENST00000527099.2:0
ENST00000681489.1:0
ENST00000525870.6:0
ENST00000530608.6:0
ENST00000680063.1:0
ENST00000679986.1:0
ENST00000681699.1:0
ENST00000680459.1:0
ENST00000679685.1:0
ENST00000681384.1:0
ENST00000679874.1:0
ENST00000679444.1:0
ENST00000680142.1:0
ENST00000681723.1:0
ENST00000680797.1:0
ENST00000680256.1:0
ENST00000679697.1:0
ENST00000680580.1:0
ENST00000526849.6:0
ENST00000299626.10:0
ENST00000680467.1:0
ENST00000679497.1:0
ENST00000681351.1:0
ENST00000681575.1:0
ENST00000376156.7:0
ENST00000680829.1:0
ENST00000680101.1:0
ENST00000679648.1:0
ENST00000532306.6:0
ENST00000680996.1:0
ENST00000532440.6:0
ENST00000525761.3:0
ENST00000680399.1:0
ENST00000532552.2:0
ENST00000530454.6:0
ENST00000532050.5:0
ENST00000526928.1:0
AJ224875:0
BC001133:0
AK075184:0
AK075194:0
BC017892:0
EU831448:0
KR710280:0
KR710281:0
KR712258:0
KR712269:0
KU178764:0
KU178765:0
CU674570:0
AK309050:0
GeneID:79053
HGNC/MGI_ID:HGNC:23161
UniProt_ID:A0A024R5K5 A0A0S2Z5N3 B3KQL8 E9PKA5 E9PLP7 E9PNE2 E9PP96 E9PR58 H0YCV0 H0YD42 H0YDD3 H0YDQ1 H0YDV4 H0YEE0 Q9BVK2
Nearer transcript ids and distances:
  • ENST00000526737.6:-2
  • ENST00000679559.1:-4
  • ENST00000680398.1:-4
  • ENST00000680223.1:-4
  • ENST00000679539.1:-4
  • ENST00000615266.5:-4
  • ENST00000681957.1:-4
  • ENST00000680643.1:-4
  • ENST00000525755.6:-5
  • AK098614:-9
  • ENST00000680866.1:-16
  • ENST00000681765.1:72
  • ENST00000681225.1:97
  • ENST00000681417.1:192
  • ENST00000530910.6:326
view more...
Gene_name:ALG8 alpha-1,3-glucosyltransferase
Gene_symbol:ALG8
Gene_synonyms:MGC2840
Gene_source:HGNC:23161



TATA-Box annotation


Distance to TSS:12
Nearest PromoterID:NM_024079
Entrez ID:79053
Nearest Unigene:Hs.503368
Nearest Refseq:NM_024079
Nearest Ensembl:ENSG00000159063
Gene Name:ALG8 alpha-1,3-glucosyltransferase
Gene Alias:CDG1H|PCLD3
Gene Type:protein-coding
CpG%:0.100000
GC%:0.639344
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.


















Property "Nearest transcripts" (as page type) with input value "ENST00000526737.6:-2 ENST00000679559.1:-4 ENST00000680398.1:-4 ENST00000680223.1:-4 ENST00000679539.1:-4 ENST00000615266.5:-4 ENST00000681957.1:-4 ENST00000680643.1:-4 ENST00000525755.6:-5 AK098614:-9 ENST00000680866.1:-16 ENST00000681765.1:72 ENST00000681225.1:97 ENST00000681417.1:192 ENST00000530910.6:326" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.