rfhg_141424.1
Basic information about the TSS
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Source datasets | FANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA615891|PRJNA401781 |PRJNA548673|PRJDB5282|PRJNA597322|PRJNA4843412|DRA013844 | |||||||||||||||
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Protocol | CAGE|TSS_database|TSS-seq|TIF-seq2|oligo_capping |ReCappable-seq|SLIC_CAGE|RAMPAGE|C1CAGE|STRIPE-seq|NETCAGE | |||||||||||||||
TSS cluster detected* | 16 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | PLS,CTCF-bound (EH38D2473012,EH38E1555119) |
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Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 12 |
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Nearest PromoterID: | NM_024079 |
Entrez ID: | 79053 |
Nearest Unigene: | Hs.503368 |
Nearest Refseq: | NM_024079 |
Nearest Ensembl: | ENSG00000159063 |
Gene Name: | ALG8 alpha-1,3-glucosyltransferase |
Gene Alias: | CDG1H|PCLD3 |
Gene Type: | protein-coding |
CpG%: | 0.100000 |
GC%: | 0.639344 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000526737.6:-2 ENST00000679559.1:-4 ENST00000680398.1:-4 ENST00000680223.1:-4 ENST00000679539.1:-4 ENST00000615266.5:-4 ENST00000681957.1:-4 ENST00000680643.1:-4 ENST00000525755.6:-5 AK098614:-9 ENST00000680866.1:-16 ENST00000681765.1:72 ENST00000681225.1:97 ENST00000681417.1:192 ENST00000530910.6:326" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.