rfhg_142264.1

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Basic information about the TSS


TSS ID:rfhg_142264.1
Species:human
Chr:chr11
Start:95230799
End:95230808
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2485278,EH38E1562457)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000543150.2:-403
GeneID:101929295
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000668554.1:446
Gene_name:lncRNA imatinib upregulated
Gene_symbol:LNCRNA-IUR
Gene_synonyms:
Gene_source:EntrezGene:101929295



TATA-Box annotation


Distance to TSS:399
Nearest PromoterID:NM_144665
Entrez ID:143686
Nearest Unigene:Hs.120633
Nearest Refseq:NM_144665
Nearest Ensembl:ENSG00000149212
Gene Name:lncRNA imatinib upregulated
Gene Alias:SEST3
Gene Type:protein-coding
CpG%:0.111111
GC%:0.700000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.