rfhg_142808.1

Basic information about the TSS

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TSS ID: rfhg_142808.1 TSS ID(Version3): hg_122144.1 hg_122143.1 Species: human Chr: chr11		Start: 108222603 End: 108222663 Strand: -
Source datasets	FANTOM5|PRJNA401781|PRJNA548673|PRJDB5282|PRJNA4843412 |DRA013844|PRJNA615891|PRJNA597322
Protocol	CAGE|oligo_capping|C1CAGE|ReCappable-seq|NETCAGE|RAMPAGE |SLIC_CAGE|STRIPE-seq
TSS cluster detected*	11

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	-
Category:	-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000278612.9:0 ENST00000610253.5:0 ENST00000531384.1:0 AK290020:0 BC040356:0 BC050561:0 BC094769:0 GeneID: 4863 HGNC/MGI_ID: HGNC:7896 UniProt_ID: E9PKJ1 Q14207 Nearer transcript ids and distances: D83243:1 X97186:33 AK291687:41 BC136270:44 AB527441:66 U58852:67 LF377063:156 MA612640:156 view more...

Gene_name: nuclear protein, coactivator of histone transcription Gene_symbol: NPAT Gene_synonyms: E14 p220 Gene_source: HGNC:7896

TATA-Box annotation

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Distance to TSS:	5
Nearest PromoterID:	NM_002519
Entrez ID:	4863
Nearest Unigene:	Hs.171061
Nearest Refseq:	NM_002519
Nearest Ensembl:	ENSG00000149308
Gene Name:	nuclear protein, coactivator of histone transcription
Gene Alias:	E14|E14/NPAT|p220
Gene Type:	protein-coding
CpG%:	0.100000
GC%:	0.639344
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.