rfhg_144096.1

Basic information about the TSS

TSS ID:	rfhg_144096.1
Species:	human
Chr:	chr11

Start:	119185450
End:	119185463
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2504251,EH38E1574820)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000527308.5:0
GeneID:	79849
HGNC/MGI_ID:	HGNC:19891
UniProt_ID:
Nearer transcript ids and distances:	ENST00000526279.5:12 ENST00000527951.5:12 ENST00000525131.5:12 ENST00000534790.5:12 ENST00000529098.5:12 ENST00000527028.5:12 ENST00000355547.10:12 ENST00000531114.5:12 NM_024791.4:12 NM_001168468.2:12 NR_033122.2:12 AK298333:12 AK026409:12 AK091966:12 BX648391:12 ENST00000533688.5:17 AK315403:17 ENST00000526836.1:20 ENST00000528730.1:23 ENST00000322712.4:23 BC029042:23 ENST00000529573.1:24 CU688588:32 AY047359:32 AB094096:37 view more...

Gene_name:	NHERF family PDZ scaffold protein 4
Gene_symbol:	NHERF4
Gene_synonyms:	FLJ22756 IKEPP NaPi-Cap2
Gene_source:	HGNC:19891

TATA-Box annotation

Distance to TSS:	-19
Nearest PromoterID:	NR_033122
Entrez ID:	79849
Nearest Unigene:	Hs.374726
Nearest Refseq:	NM_024791
Nearest Ensembl:	ENSG00000172367
Gene Name:	NHERF family PDZ scaffold protein 4
Gene Alias:	IKEPP\|NHERF4\|PDZK2
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

Property "Nearest transcripts" (as page type) with input value "ENST00000526279.5:12 ENST00000527951.5:12 ENST00000525131.5:12 ENST00000534790.5:12 ENST00000529098.5:12 ENST00000527028.5:12 ENST00000355547.10:12 ENST00000531114.5:12 NM_024791.4:12 NM_001168468.2:12 NR_033122.2:12 AK298333:12 AK026409:12 AK091966:12 BX648391:12 ENST00000533688.5:17 AK315403:17 ENST00000526836.1:20 ENST00000528730.1:23 ENST00000322712.4:23 BC029042:23 ENST00000529573.1:24 CU688588:32 AY047359:32 AB094096:37" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.