rfhg_144313.1

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Basic information about the TSS


TSS ID:rfhg_144313.1
Species:human
Chr:chr11
Start:121452962
End:121452978
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2506680,EH38E1576561)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK091275:-35
GeneID:105369536
HGNC/MGI_ID:HGNC:55594
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000529160.1:43
Gene_name:SORL1 antisense RNA 1
Gene_symbol:SORL1-AS1
Gene_synonyms:
Gene_source:HGNC:55594



TATA-Box annotation


Distance to TSS:656
Nearest PromoterID:NM_003105
Entrez ID:6653
Nearest Unigene:Hs.368592
Nearest Refseq:NM_003105
Nearest Ensembl:ENSG00000137642
Gene Name:SORL1 antisense RNA 1
Gene Alias:C11orf32|LR11|LRP9|SORLA|SorLA-1|gp250
Gene Type:protein-coding
CpG%:0.062500
GC%:0.705882
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.