rfhg_144489.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_144489.1
Species:human
Chr:chr11
Start:123059414
End:123059426
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2508242,EH38E1577758)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000365382.1:0
GeneID:85389
HGNC/MGI_ID:HGNC:30352
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000524552.5:-22
  • BC112920:-62
  • BC015699:162
  • BC008907:313
  • ENST00000526686.1:317
  • NR_001454.2:419
view more...
Gene_name:small nucleolar RNA, C/D box 14C
Gene_symbol:SNORD14C
Gene_synonyms:
Gene_source:HGNC:30352



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NR_001453
Entrez ID:85389
Nearest Unigene:
Nearest Refseq:NR_001453
Nearest Ensembl:ENSG00000202252
Gene Name:small nucleolar RNA, C/D box 14C
Gene Alias:-
Gene Type:snoRNA
CpG%:0.083333
GC%:0.538462
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.