rfhg_144727.1

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Basic information about the TSS


TSS ID:rfhg_144727.1
Species:human
Chr:chr11
Start:124746783
End:124746801
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2509586,EH38E1578702)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF376079:57
MA611656:57
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LF208419:-408
  • MA443996:-408
  • LF376080:410
  • MA611657:410
  • ENST00000531241.1:446
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:5463
Nearest PromoterID:NM_001329920
Entrez ID:23584
Nearest Unigene:Hs.112377
Nearest Refseq:NM_014312
Nearest Ensembl:ENSG00000019102
Gene Name:
Gene Alias:2210413P10Rik|CTH|CTXL
Gene Type:protein-coding
CpG%:0.111111
GC%:0.421053
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):