rfhg_146052.1

Basic information about the TSS

---

TSS ID: rfhg_146052.1 TSS ID(Version3): hg_123583.1 Species: human Chr: chr12		Start: 4649087 End: 4649159 Strand: +
Source datasets	FANTOM5|DBTSS|DRA000914|ENCODE|PRJNA548673|PRJNA401781 |PRJNA615891|DRA013844|PRJDB5282|PRJNA4843412|PRJNA597322
Protocol	CAGE|TSS-seq|oligo_capping|ReCappable-seq|SLIC_CAGE|C1CAGE |RAMPAGE|NETCAGE|TIF-seq2|STRIPE-seq
TSS cluster detected*	15

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

---

Description:	PLS,CTCF-bound (EH38D2524049,EH38E1588776)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

---

Nearest transcript id and distance: ENST00000539573.5:0 ENST00000266544.10:0 ENST00000542369.5:0 ENST00000396655.6:0 ENST00000544679.1:0 BC015837:0 AF050641:0 AK308588:0 BC009311:0 AK291067:0 BC111546:0 L04490:0 GeneID: 4704 HGNC/MGI_ID: HGNC:7693 UniProt_ID: A8K4V2 Q16795 Nearer transcript ids and distances:

Gene_name: NADH:ubiquinone oxidoreductase subunit A9 Gene_symbol: NDUFA9 Gene_synonyms: CI-39k COQ11 SDR22E1 Gene_source: HGNC:7693

TATA-Box annotation

---

Distance to TSS:	9
Nearest PromoterID:	NM_005002
Entrez ID:	4704
Nearest Unigene:	Hs.75227
Nearest Refseq:	NM_005002
Nearest Ensembl:	ENSG00000139180
Gene Name:	NADH:ubiquinone oxidoreductase subunit A9
Gene Alias:	CC6|CI-39k|CI39k|COQ11|MC1DN26|NDUFS2L|SDR22E1
Gene Type:	protein-coding
CpG%:	0.083333
GC%:	0.643836
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.