rfhg_146798.1

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Basic information about the TSS


TSS ID:rfhg_146798.1
TSS ID(Version3):hg_129306.1
Species:human
Chr:chr12
Start:7936143
End:7936231
Strand:-
Source datasetsFANTOM5|EPD|ENCODE|PRJDB5282|PRJNA4843412|DRA013844
|PRJNA401781|PRJNA548673|PRJNA615891|PRJNA597322
ProtocolCAGE|TSS_database|C1CAGE|NETCAGE|RAMPAGE|ReCappable-seq
|TIF-seq2|SLIC_CAGE|oligo_capping|STRIPE-seq
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2527283,EH38E1591032)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000075120.12:0
ENST00000486749.5:0
ENST00000495813.5:0
ENST00000544291.1:0
ENST00000544936.1:0
ENST00000476634.1:0
ENST00000541671.1:0
AB209607:0
BC039196:0
AK304509:0
AK298673:0
AK312386:0
GeneID:6515
HGNC/MGI_ID:HGNC:11007
UniProt_ID:B7Z5A7 B7Z966 F5GYR5 F5GYX0 P11169 Q59F54
Nearer transcript ids and distances:
  • LF365744:1
  • MA601321:1
  • LP895259:-44
  • M20681:-44
  • LF384190:-65
  • MA619767:-65
  • CU691674:109
  • DQ891118:109
  • DQ894297:109
  • DQ894299:109
  • CR457413:109
  • KJ892147:109
  • LF365743:199
  • MA601320:199
  • LF365742:370
  • MA601319:370
view more...
Gene_name:solute carrier family 2 member 3
Gene_symbol:SLC2A3
Gene_synonyms:
Gene_source:HGNC:11007



TATA-Box annotation


Distance to TSS:0
Nearest PromoterID:NM_006931
Entrez ID:6515
Nearest Unigene:Hs.419240
Nearest Refseq:NM_006931
Nearest Ensembl:ENSG00000059804
Gene Name:solute carrier family 2 member 3
Gene Alias:GLUT3
Gene Type:protein-coding
CpG%:0.034091
GC%:0.471910
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.