rfhg_148369.1

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Basic information about the TSS


TSS ID:rfhg_148369.1
Species:human
Chr:chr12
Start:20368973
End:20368981
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2536858,EH38E1597524)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF213064:-73
MA448641:-73
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • BC117369:264
  • BC117371:264
  • M91667:275
  • AJ005036:282
  • KJ897307:301
  • U36798:304
  • LF212076:-353
  • MA447653:-353
  • ENST00000359062.4:-436
  • NM_001378407.1:-436
  • NM_000921.5:-436
  • NM_001378408.1:-436
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-268
Nearest PromoterID:NM_000921
Entrez ID:5139
Nearest Unigene:Hs.386791
Nearest Refseq:NM_000921
Nearest Ensembl:ENSG00000172572
Gene Name:
Gene Alias:CGI-PDE|CGI-PDE A|CGI-PDE-A|HTNB
Gene Type:protein-coding
CpG%:0.000000
GC%:0.444444
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):