rfhg_148924.1

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Basic information about the TSS


TSS ID:rfhg_148924.1
TSS ID(Version3):hg_124843.1
hg_234149.1
Species:human
Chr:chr12
Start:27524128
End:27524251
Strand:+
Source datasetsDRA000914|PRJNA4843412|DRA013844|PRJDB5282|PRJNA548673
|PRJNA615891|PRJNA401781
ProtocolCAGE|NETCAGE|C1CAGE|SLIC_CAGE|RAMPAGE|ReCappable-seq
|TIF-seq2
TSS cluster detected*10

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2542247,EH38E1601120)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000545381.5:0
ENST00000545334.5:0
ENST00000540114.5:0
ENST00000541633.5:0
ENST00000537927.5:0
ENST00000228425.11:0
ENST00000318304.12:0
ENST00000535047.5:0
ENST00000542629.5:0
BC022873:0
BC001560:0
AK294267:0
AB033056:0
BC050281:0
AB049149:0
AK314350:0
GeneID:8496
HGNC/MGI_ID:HGNC:9249
UniProt_ID:A0A024RB02 A0A0A0MTP2 B4DFU8 F5GZP6 F5H0E0 Q05CN4 Q86W92
Nearer transcript ids and distances:
  • AF034802:7
  • BC046159:44
view more...
Gene_name:PPFIA binding protein 1
Gene_symbol:PPFIBP1
Gene_synonyms:L2 SGT2 hSGT2 hSgt2p
Gene_source:HGNC:9249



TATA-Box annotation


Distance to TSS:-17
Nearest PromoterID:NM_001198916
Entrez ID:8496
Nearest Unigene:Hs.172445
Nearest Refseq:NM_003622
Nearest Ensembl:ENSG00000110841
Gene Name:PPFIA binding protein 1
Gene Alias:L2|SGT2|hSGT2|hSgt2p
Gene Type:protein-coding
CpG%:0.032520
GC%:0.645161
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.