rfhg_149176.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2545726,EH38E1603313) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -32 |
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| Nearest PromoterID: | NM_001278412 |
| Entrez ID: | 196394 |
| Nearest Unigene: | Hs.585084 |
| Nearest Refseq: | NM_001113402 |
| Nearest Ensembl: | ENSG00000151743 |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.105263 |
| GC%: | 0.700000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "ENST00000535408.5:76 LP895265:79 BC045831:79 ENST00000541931.5:87 ENST00000509386.2:97 AK311214:97 BC037897:119 ENST00000422146.6:140 BC067906:147 ENST00000281471.11:176 ENST00000536761.5:176 ENST00000542781.5:176 ENST00000457428.6:176 ENST00000541541.5:176 NM_001278412.2:176 NM_001113402.2:176 NM_001278411.2:176 NR_103522.2:176 AL833434:176 AK123033:176 AK302112:176 AK311249:176 ENST00000537960.5:178 ENST00000537562.5:187" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.