rfhg_15028.1

Basic information about the TSS

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TSS ID: rfhg_15028.1 TSS ID(Version3): hg_15606.1 Species: human Chr: chr1		Start: 161177488 End: 161177537 Strand: -
Source datasets	FANTOM5|EPD|DRA000914|PRJNA548673|PRJNA401781|PRJNA615891 |PRJNA597322|PRJDB5282|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|ReCappable-seq|oligo_capping|SLIC_CAGE |TIF-seq2|RAMPAGE|STRIPE-seq|C1CAGE|NETCAGE
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2230872,EH38E1391143)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000319769.10:0 ENST00000367998.5:0 ENST00000493164.5:0 ENST00000460415.1:0 ENST00000482288.1:0 AK092493:0 AK023311:0 BC009985:0 AK291455:0 GeneID: 8703 HGNC/MGI_ID: HGNC:926 UniProt_ID: A0A384NY44 A8K5Z0 B3KRZ6 Nearer transcript ids and distances: BC006099:3 AF020921:5 ENST00000466504.5:9 ENST00000467863.1:9 BC000276:17 ENST00000496313.5:20 AF038661:26 ENST00000470882.5:68 AK056851:68 LF320706:209 MA556283:209 ENST00000487004.5:339 ENST00000622395.4:-431 NM_001199873.1:-431 NM_001199874.1:-431 view more...

Gene_name: beta-1,4-galactosyltransferase 3 Gene_symbol: B4GALT3 Gene_synonyms: beta4Gal-T3 Gene_source: HGNC:926

TATA-Box annotation

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Distance to TSS:	-5
Nearest PromoterID:	NM_003779
Entrez ID:	8703
Nearest Unigene:	Hs.321231
Nearest Refseq:	NM_003779
Nearest Ensembl:	ENSG00000158850
Gene Name:	beta-1,4-galactosyltransferase 3
Gene Alias:	beta4Gal-T3
Gene Type:	protein-coding
CpG%:	0.142857
GC%:	0.800000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.