rfhg_150824.1
Basic information about the TSS
|
| |||||||||||||
| Source datasets | FANTOM5 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D2559809,EH38E1612666) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
|
|
TATA-Box annotation
| Distance to TSS: | -202 |
|---|---|
| Nearest PromoterID: | NM_005554 |
| Entrez ID: | 3853 |
| Nearest Unigene: | Hs.700779 |
| Nearest Refseq: | NM_005554 |
| Nearest Ensembl: | ENSG00000205420 |
| Gene Name: | |
| Gene Alias: | CK-6C|CK-6E|CK6A|CK6C|CK6D|K6A|K6C|K6D|KRT6C|KRT6D|PC3 |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.454545 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "ENST00000330722.7:197 NM_005554.4:197 AK290245:197 AK299386:198 AK301686:198 AK299428:198 BC014152:216 BC008807:218 BC069269:236 DQ890619:263 DQ893788:263 AB528521:264 BC125058:265 BC139753:265 KJ891523:265 KJ897110:265 KR710037:265 KR710038:265 KR710039:265 KR710040:265 KR712234:265 KR712236:265 KR712237:265 KR712241:265 BT006899:266 KU178157:266 KU178158:266" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.