rfhg_151342.1

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Basic information about the TSS


TSS ID:rfhg_151342.1
Species:human
Chr:chr12
Start:53939848
End:53939864
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2561497,EH38E1613954)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000512916.2:205
GeneID:100874366
HGNC/MGI_ID:HGNC:43753
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:HOXC13 antisense RNA
    Gene_symbol:HOXC13-AS
    Gene_synonyms:
    Gene_source:HGNC:43753



    TATA-Box annotation


    Distance to TSS:-213
    Nearest PromoterID:NR_047507
    Entrez ID:100874366
    Nearest Unigene:Hs.547385
    Nearest Refseq:NR_047507
    Nearest Ensembl:ENSG00000249641
    Gene Name:HOXC13 antisense RNA
    Gene Alias:HOXC-AS5
    Gene Type:ncRNA
    CpG%:0.000000
    GC%:0.411765
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.