rfhg_151446.1

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Basic information about the TSS


TSS ID:rfhg_151446.1
TSS ID(Version3):hg_131298.1
Species:human
Chr:chr12
Start:54188924
End:54188996
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|ENCODE|PRJNA548673|PRJNA401781
|PRJNA615891|PRJNA4843412|DRA013844|PRJDB5282
ProtocolCAGE|TSS_database|ReCappable-seq|SLIC_CAGE|oligo_capping
|TIF-seq2|RAMPAGE|NETCAGE|C1CAGE
TSS cluster detected*14

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2561925,EH38E1614330)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000635234.1:0
ENST00000513838.5:0
ENST00000682136.1:0
ENST00000508394.6:0
ENST00000514685.5:0
ENST00000505128.5:0
ENST00000337581.7:0
ENST00000243112.9:0
ENST00000514196.5:0
ENST00000511522.5:0
ENST00000507904.5:0
ENST00000503447.1:0
ENST00000504797.1:0
ENST00000506169.5:0
ENST00000503306.5:0
ENST00000505597.1:0
ENST00000503231.1:0
AK091468:0
AK001789:0
AK001235:0
BC105607:0
AK290274:0
AK222473:0
GeneID:23583
HGNC/MGI_ID:HGNC:17148
UniProt_ID:A0A024RAZ8 A0A0S2Z526 D6RA25 D6RAI1 D6RAS0 D6RD88 D6RI04 D6RIA4
Nearer transcript ids and distances:
  • ENST00000635546.1:-12
  • BC000417:21
  • ENST00000504338.5:53
  • BC088352:119
  • ENST00000401977.6:302
  • ENST00000506595.5:317
view more...
Gene_name:single-strand-selective monofunctional uracil-DNA glycosylase 1
Gene_symbol:SMUG1
Gene_synonyms:FDG HMUDG UNG3
Gene_source:HGNC:17148



TATA-Box annotation


Distance to TSS:-3
Nearest PromoterID:NM_001351257
Entrez ID:23583
Nearest Unigene:Hs.632721
Nearest Refseq:NM_014311
Nearest Ensembl:ENSG00000123415
Gene Name:single-strand-selective monofunctional uracil-DNA glycosylase 1
Gene Alias:FDG|HMUDG|UNG3
Gene Type:protein-coding
CpG%:0.041667
GC%:0.643836
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.