rfhg_152415.1

Basic information about the TSS

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TSS ID: rfhg_152415.1 TSS ID(Version3): hg_131709.1 Species: human Chr: chr12		Start: 57520461 End: 57520521 Strand: -
Source datasets	FANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJDB5282|PRJNA615891 |PRJNA401781|PRJNA548673|PRJNA597322|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|TSS-seq|C1CAGE|TIF-seq2|oligo_capping |SLIC_CAGE|RAMPAGE|ReCappable-seq|STRIPE-seq|NETCAGE
TSS cluster detected*	16

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2564833,EH38E1616652)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000547303.5:0 ENST00000551116.5:0 ENST00000346473.8:0 ENST00000552740.5:0 ENST00000547526.1:0 AY461580:0 BC003637:0 S40706:0 AK316581:0 BC107859:0 GeneID: 1649 HGNC/MGI_ID: HGNC:2726 UniProt_ID: F8W133 P35638 Q53YD1 Nearer transcript ids and distances: LF208930:-40 MA444507:-40 LF324162:49 MA559739:49 view more...

Gene_name: DNA damage inducible transcript 3 Gene_symbol: DDIT3 Gene_synonyms: CHOP CHOP10 GADD153 Gene_source: HGNC:2726

TATA-Box annotation

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Distance to TSS:	26
Nearest PromoterID:	NM_001195056
Entrez ID:	1649
Nearest Unigene:	Hs.505777
Nearest Refseq:	NM_004083
Nearest Ensembl:	ENSG00000175197
Gene Name:	DNA damage inducible transcript 3
Gene Alias:	AltDDIT3|C/EBPzeta|CEBPZ|CHOP|CHOP-10|CHOP10|GADD153
Gene Type:	protein-coding
CpG%:	0.050000
GC%:	0.491803
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.