rfhg_152742.1
Basic information about the TSS
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| Source datasets | FANTOM5|EPD|DRA000914|ENCODE|PRJNA4843412|DRA013844 |PRJNA401781|PRJNA548673|PRJNA615891|PRJDB5282|PRJNA597322 | |||||||||||||||
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| Protocol | CAGE|TSS_database|NETCAGE|RAMPAGE|ReCappable-seq|SLIC_CAGE |C1CAGE|TIF-seq2|STRIPE-seq|oligo_capping | |||||||||||||||
| TSS cluster detected* | 15 | |||||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2568121,EH38E1618528) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -9 |
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| Nearest PromoterID: | NM_001278470 |
| Entrez ID: | 23041 |
| Nearest Unigene: | Hs.389378 |
| Nearest Refseq: | NM_015026 |
| Nearest Ensembl: | ENSG00000061987 |
| Gene Name: | MON2 homolog, regulator of endosome-to-Golgi trafficking |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.130435 |
| GC%: | 0.659574 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Property "Nearest transcripts" (as page type) with input value "ENST00000549378.5:4 BC111488:4 ENST00000547095.5:8 ENST00000552738.5:8 ENST00000393629.6:8 BC136621:8 BC144309:8 BC144324:8 ENST00000552115.5:9 BC141817:9 BC142710:9 AB028963:9 BC151241:9 BC042679:197 ENST00000549286.1:222 AB017814:254 AB384555:367 AM393119:367" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.