rfhg_153400.1

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Basic information about the TSS


TSS ID:rfhg_153400.1
Species:human
Chr:chr12
Start:69739349
End:69739349
Strand:+
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2574657,EH38E1623171)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NM_175625.4:32
NM_175623.4:32
NR_103520.2:32
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000550536.5:41
  • ENST00000378809.8:51
  • ENST00000362025.9:51
  • ENST00000552199.5:59
  • AJ312897:59
  • AJ312899:59
  • AJ312901:59
  • ENST00000549760.1:-240
  • BC002556:-446
  • AK057844:446
  • BC059358:-449
  • BC014553:-473
  • ENST00000378815.10:-487
  • ENST00000417413.7:-487
  • ENST00000483530.6:-487
  • AK225441:-487
  • AJ312896:-487
  • AJ312898:-487
  • AJ312900:-487
  • AK026201:-487
  • ENST00000247833.12:-489
  • NM_175624.4:-489
  • NM_022456.5:-489
  • NR_103519.2:-489
  • AK314547:-498
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-32
Nearest PromoterID:NM_175625
Entrez ID:117177
Nearest Unigene:Hs.258209
Nearest Refseq:NM_022456
Nearest Ensembl:ENSG00000127328
Gene Name:
Gene Alias:RABIN3|RABIN8
Gene Type:protein-coding
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):




















Property "Nearest transcripts" (as page type) with input value "ENST00000550536.5:41 ENST00000378809.8:51 ENST00000362025.9:51 ENST00000552199.5:59 AJ312897:59 AJ312899:59 AJ312901:59 ENST00000549760.1:-240 BC002556:-446 AK057844:446 BC059358:-449 BC014553:-473 ENST00000378815.10:-487 ENST00000417413.7:-487 ENST00000483530.6:-487 AK225441:-487 AJ312896:-487 AJ312898:-487 AJ312900:-487 AK026201:-487 ENST00000247833.12:-489 NM_175624.4:-489 NM_022456.5:-489 NR_103519.2:-489 AK314547:-498" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.