rfhg_154094.1

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Basic information about the TSS


TSS ID:rfhg_154094.1
Species:human
Chr:chr12
Start:80444170
End:80444199
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS (EH38D2582297,EH38E1627795)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000644991.3:36
GeneID:374462
HGNC/MGI_ID:
UniProt_ID:A0A087WZU1
Nearer transcript ids and distances:
    Gene_name:protein tyrosine phosphatase receptor type Q
    Gene_symbol:PTPRQ
    Gene_synonyms:DFNA73 DFNB84 DFNB84A PTPGMC1 R-PTP-Q
    Gene_source:EntrezGene:374462



    TATA-Box annotation


    Distance to TSS:-51
    Nearest PromoterID:NM_001145026
    Entrez ID:374462
    Nearest Unigene:Hs.539284
    Nearest Refseq:NM_001145026
    Nearest Ensembl:ENSG00000139304
    Gene Name:protein tyrosine phosphatase receptor type Q
    Gene Alias:DFNA73|DFNB84|DFNB84A|PTPGMC1|R-PTP-Q
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.433333
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.