rfhg_155310.1

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Basic information about the TSS


TSS ID:rfhg_155310.1
Species:human
Chr:chr12
Start:100142831
End:100142889
Strand:-
Source datasetsPRJNA4843412|DRA013844|PRJDB5282|PRJNA401781|PRJNA548673
|PRJNA615891
ProtocolNETCAGE|CAGE|C1CAGE|ReCappable-seq|SLIC_CAGE
TSS cluster detected*7

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2597311,EH38E1637263)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000279907.12:0
ENST00000356828.7:0
BC014891:0
GeneID:23074
HGNC/MGI_ID:HGNC:29102
UniProt_ID:A0JNW5
Nearer transcript ids and distances:
  • ENST00000547428.1:7
  • AK125813:7
  • BC127017:149
  • KJ906079:195
view more...
Gene_name:bridge-like lipid transfer protein family member 3B
Gene_symbol:BLTP3B
Gene_synonyms:KIAA0701 SHIP164 SHIP164A
Gene_source:HGNC:29102



TATA-Box annotation


Distance to TSS:14
Nearest PromoterID:NM_001006947
Entrez ID:23074
Nearest Unigene:Hs.572154
Nearest Refseq:NM_015054
Nearest Ensembl:ENSG00000111647
Gene Name:bridge-like lipid transfer protein family member 3B
Gene Alias:SHIP164
Gene Type:protein-coding
CpG%:0.103448
GC%:0.711864
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.