rfhg_155489.1
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D2598714,EH38E1638204) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -8 |
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| Nearest PromoterID: | NM_001301107 |
| Entrez ID: | 51019 |
| Nearest Unigene: | Hs.405692 |
| Nearest Refseq: | NM_016053 |
| Nearest Ensembl: | ENSG00000120860 |
| Gene Name: | |
| Gene Alias: | CCDC53|CGI-116 |
| Gene Type: | protein-coding |
| CpG%: | 0.111111 |
| GC%: | 0.800000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "ENST00000539515.5:-12 ENST00000545679.5:49 ENST00000544341.5:55 AF151874:59 AF155655:59 AK223339:70 AK314970:86 ENST00000535501.5:94 ENST00000500685.6:116 ENST00000540536.5:128 BC010889:133 ENST00000240079.11:137 ENST00000326351.11:137 NM_016053.4:137 ENST00000541569.5:150 ENST00000538761.5:154 ENST00000536930.1:154 CR457171:166 HQ448683:166 KJ898801:166 AB587430:166 CU679841:166" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.