rfhg_155773.1

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Basic information about the TSS


TSS ID:rfhg_155773.1
TSS ID(Version3):hg_127789.1
Species:human
Chr:chr12
Start:104986296
End:104986349
Strand:+
Source datasetsFANTOM5|EPD|DBTSS|DRA000914|ENCODE|PRJNA4843412|PRJNA548673
|DRA013844|PRJDB5282|PRJNA597322|PRJNA401781|PRJNA615891
ProtocolCAGE|TSS_database|TSS-seq|NETCAGE|C1CAGE|STRIPE-seq
|ReCappable-seq|RAMPAGE|oligo_capping|SLIC_CAGE|TIF-seq2
TSS cluster detected*16

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2601153,EH38E1639928)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000552951.7:0
ENST00000637147.1:0
ENST00000622317.5:0
ENST00000547750.2:0
ENST00000280749.5:0
BC032326:0
GeneID:121053
HGNC/MGI_ID:HGNC:28628
UniProt_ID:A0A087WT30 J3KN91 Q8N5I9
Nearer transcript ids and distances:
  • CU689336:2
  • DQ891649:3
  • DQ894838:3
view more...
Gene_name:NOP protein chaperone 1
Gene_symbol:NOPCHAP1
Gene_synonyms:DDSR1 MGC40397
Gene_source:HGNC:28628



TATA-Box annotation


Distance to TSS:6
Nearest PromoterID:NM_152318
Entrez ID:121053
Nearest Unigene:Hs.295563
Nearest Refseq:NM_152318
Nearest Ensembl:ENSG00000151131
Gene Name:NOP protein chaperone 1
Gene Alias:-
Gene Type:protein-coding
CpG%:0.037736
GC%:0.611111
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.