rfhg_156010.1

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Basic information about the TSS


TSS ID:rfhg_156010.1
Species:human
Chr:chr12
Start:108561158
End:108561181
Strand:-
Source datasetsPRJNA615891|PRJNA401781|PRJNA548673|PRJNA4843412
|PRJNA597322|DRA013844|PRJDB5282
ProtocolTIF-seq2|RAMPAGE|oligo_capping|CAGE|ReCappable-seq
|SLIC_CAGE|NETCAGE|STRIPE-seq|C1CAGE
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2604511,EH38E1642257)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000546815.6:0
ENST00000651280.1:0
ENST00000228284.8:0
ENST00000546728.5:0
ENST00000431469.6:0
ENST00000547528.5:0
ENST00000552221.1:0
AB020880:0
AF387506:0
AK290209:0
BC093784:0
BC111983:0
BC143253:0
AK225174:0
AK304834:0
BC004547:0
BC024279:0
BC032601:0
GeneID:9733
HGNC/MGI_ID:HGNC:16860
UniProt_ID:A0A494C0L2 A0A499FI31 B4E3R6 F8W667 Q15020
Nearer transcript ids and distances:
  • BC103706:1
  • D63879:4
  • KJ898083:4
  • KR712178:4
  • AB385287:4
  • ENST00000546611.1:-219
  • BC015627:-219
  • BC041638:-219
view more...
Gene_name:spliceosome associated factor 3, U4/U6 recycling protein
Gene_symbol:SART3
Gene_synonyms:KIAA0156 RP11-13G14 TIP110 p110
Gene_source:HGNC:16860



TATA-Box annotation


Distance to TSS:4
Nearest PromoterID:NM_014706
Entrez ID:9733
Nearest Unigene:Hs.584842
Nearest Refseq:NM_014706
Nearest Ensembl:ENSG00000075856
Gene Name:spliceosome associated factor 3, U4/U6 recycling protein
Gene Alias:DSAP1|P100|RP11-13G14|TIP110|p110|p110(nrb)
Gene Type:protein-coding
CpG%:0.086957
GC%:0.541667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.