rfhg_156259.1

Basic information about the TSS

TSS ID:	rfhg_156259.1
Species:	human
Chr:	chr12

Start:	110430378
End:	110430387
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	CTCF-only,CTCF-bound (EH38D2606460,EH38E1643847)
Category:	CTCF-only

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000549577.2:96
GeneID:
HGNC/MGI_ID:	HGNC:13323
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	high mobility group AT-hook 1 pseudogene 3
Gene_symbol:	HMGA1P3
Gene_synonyms:	HMGIYL3
Gene_source:	HGNC:13323

TATA-Box annotation

Distance to TSS:	19955
Nearest PromoterID:	NM_001278556
Entrez ID:	10094
Nearest Unigene:	Hs.524741
Nearest Refseq:	NM_001278556
Nearest Ensembl:	ENSG00000111229
Gene Name:	high mobility group AT-hook 1 pseudogene 3
Gene Alias:	ARC21\|p21-Arc
Gene Type:	protein-coding
CpG%:	0.111111
GC%:	0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.