rfhg_156929.1

Basic information about the TSS

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TSS ID: rfhg_156929.1 TSS ID(Version3): hg_128259.1 Species: human Chr: chr12		Start: 118016696 End: 118016789 Strand: +
Source datasets	FANTOM5|EPD|DRA000914|PRJDB5282|PRJNA401781|PRJNA615891 |PRJNA548673|PRJNA597322|PRJNA4843412|DRA013844
Protocol	CAGE|TSS_database|C1CAGE|SLIC_CAGE|ReCappable-seq |oligo_capping|STRIPE-seq|RAMPAGE|TIF-seq2|NETCAGE
TSS cluster detected*	14

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2613391,EH38E1648593)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: ENST00000537315.5:0 ENST00000454402.7:0 ENST00000484086.6:0 ENST00000420967.5:0 ENST00000392542.6:0 ENST00000535092.1:0 AK291107:0 AK094575:0 AK290685:0 BC001866:0 BC013961:0 AB208992:0 BC020440:0 GeneID: 5985 HGNC/MGI_ID: HGNC:9973 UniProt_ID: A8K3S0 A8K4Z2 C9JH72 F5H0U6 F5H304 F5H5S0 P40937 Q59GW7 Nearer transcript ids and distances: L07540:32 AB464140:35 CU674898:38 HQ447800:38 KJ891997:38 CR407651:39 view more...

Gene_name: replication factor C subunit 5 Gene_symbol: RFC5 Gene_synonyms: RFC36 Gene_source: HGNC:9973

TATA-Box annotation

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Distance to TSS:	39
Nearest PromoterID:	NM_007370
Entrez ID:	5985
Nearest Unigene:	Hs.731908
Nearest Refseq:	NM_007370
Nearest Ensembl:	ENSG00000111445
Gene Name:	replication factor C subunit 5
Gene Alias:	RFC36
Gene Type:	protein-coding
CpG%:	0.107527
GC%:	0.638298
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.