rfhg_157138.1

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Basic information about the TSS


TSS ID:rfhg_157138.1
TSS ID(Version3):hg_133625.1
Species:human
Chr:chr12
Start:120291887
End:120291905
Strand:-
Source datasetsFANTOM5|EPD|DRA000914|PRJNA401781|PRJNA548673|PRJNA615891
|PRJNA4843412|DRA013844
ProtocolCAGE|TSS_database|ReCappable-seq|oligo_capping|SLIC_CAGE
|NETCAGE|RAMPAGE
TSS cluster detected*11

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2615221,EH38E1649827)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENST00000365668.1:0
K00473:0
GeneID:26834
HGNC/MGI_ID:HGNC:10193
UniProt_ID:
Nearer transcript ids and distances:
  • M11771:83
Gene_name:RNA, U4 small nuclear 2
Gene_symbol:RNU4-2
Gene_synonyms:U4A U4b U4c
Gene_source:HGNC:10193



TATA-Box annotation


Distance to TSS:7
Nearest PromoterID:NR_003137
Entrez ID:26834
Nearest Unigene:
Nearest Refseq:NR_003137
Nearest Ensembl:ENSG00000202538
Gene Name:RNA, U4 small nuclear 2
Gene Alias:RNU4-1B|RNU4B1|RNU4C|U4A|U4b|U4c
Gene Type:snRNA
CpG%:0.055556
GC%:0.631579
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.