rfhg_157544.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_157544.1
TSS ID(Version3):hg_128507.1
hg_128509.1
hg_128508.1
Species:human
Chr:chr12
Start:122064277
End:122064381
Strand:+
Source datasetsFANTOM5|PRJNA548673|PRJNA401781|PRJNA615891
ProtocolCAGE|RAMPAGE|oligo_capping|ReCappable-seq|SLIC_CAGE|TIF-seq2
TSS cluster detected*8

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:PLS,CTCF-bound (EH38D2617049,EH38E1651318)
Category:PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KX645782:0
KX645783:0
KX645781:0
GeneID:100506691
HGNC/MGI_ID:HGNC:56073
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:long intergenic non-protein coding RNA 2985
    Gene_symbol:LINC02985
    Gene_synonyms:AC156455.1
    Gene_source:HGNC:56073



    TATA-Box annotation


    Distance to TSS:1039
    Nearest PromoterID:NR_135044
    Entrez ID:100506691
    Nearest Unigene:Hs.536336
    Nearest Refseq:NR_135044
    Nearest Ensembl:ENSG00000256546
    Gene Name:long intergenic non-protein coding RNA 2985
    Gene Alias:-
    Gene Type:ncRNA
    CpG%:0.009615
    GC%:0.542857
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.