rfhg_157672.1

From referenceTSS
Jump to: navigation, search

Basic information about the TSS


TSS ID:rfhg_157672.1
Species:human
Chr:chr12
Start:122872243
End:122872253
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:dELS (EH38D2617821,EH38E1651910)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:AK123249:216
GeneID:79720
HGNC/MGI_ID:HGNC:25754
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:VPS37B subunit of ESCRT-I
    Gene_symbol:VPS37B
    Gene_synonyms:FLJ12750
    Gene_source:HGNC:25754



    TATA-Box annotation


    Distance to TSS:23876
    Nearest PromoterID:NM_024667
    Entrez ID:79720
    Nearest Unigene:Hs.507162
    Nearest Refseq:NM_024667
    Nearest Ensembl:ENSG00000139722
    Gene Name:VPS37B subunit of ESCRT-I
    Gene Alias:-
    Gene Type:protein-coding
    CpG%:0.000000
    GC%:0.454545
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



    TSS expression

    Expression data not found.